Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921961.1_cds_XP_016470819.1_63227
CDS Infomation

[gene=LOC107793053] [db_xref=GeneID:107793053] [protein=pectinesterase-like] [protein_id=XP_016470819.1] [location=complement(join(54914..55308,55931..56257,56993..57277,57868..58537))] [gbkey=CDS]
Sequence

ATGGCGGATGCTGGAAAAAAGAAAATAGCAATTGCTGGAATTTCTTCAATTCTTTTAGTA
GCATGTATTGTTGGTGCTGCTGTTACACTTACCAAAAAAGGAAATGATGATTCATCAAAT
TCTCAAGTTTCAACCTCTACCAAAAATGTACAAGCCATGTGTCAACCAACACAATATAAA
GAAACTTGTGAAAAAAGTCTTTTTTCAGCCAAAAATACAAGTGATCCAAAAGAATTAATT
AAAACAGCATTTGATAGTACTATTAATGAAATTGCTAGTTCAATCAAGAATTCTGCTCCA
TTTAAAGAAGCTGCAAATGATCCAAGGACTAAAGATGCATTAAAAGTTTGTGATGAGGTA
CTTGATCGTTCAATCGAAGAAATCAAGAGGTCTTTTAATAAATTTGATAGTTCCGACGTT
AAAAGCTTGGTCAAGGATTATATTTATGATCTTAGGTCATGGCTTAGCTCTGCTGTTACT
TTTGAGACAACTTGTATTGACGCGTTCGCGAATACGACCGGTGATACCGGTGAGAAAATG
AAGAACCTTTTGAAAAATGCTCATGAACTTTCCACTAATGCCCTTGATATTGTTAGTAGC
TTCGAGAAACAGGTGGAAGATTTGCAAATCTTAGGCATTAACAACCGGCGATTGTTAACC
GTTGAAGCAGGTAACCGTAGGCTTCTTCAAGTGGCACCCCTCAAGCCAAACGTCGTCGTT
GCACAAGATGGAAGTGGACAACACAAATCAATCAATGAGGCTCTTAAAACTGTGCCCCCA
AATAATGCACAACCCTATGTCATTTTTATTAAGGCTGGTATTTACAATGAGTATGTTCAA
GTTGCAAATACAATGACCAATGTTGTATTTATTGGTGAAGGCCCAAACAAGACTAAGATA
ACTGGCAACAAAAATTACCTTGATGGTCTCCCAGTTTTTAGTACTGCCACTGTTGCCATC
TCGGGACAAGGATTCGTGGCGAAGGATATCGGATTCGAGAACTCAGCAGGACCATTAAAA
CATCAAGCTGTTGCAGTCCGTGTTTCAGCTGAAATGGCAGTGTTTCAAAACTGTCAAATT
GATGGCTACCAATACACTCTTATGACTCATGTTGGTAGGCAATTCTACCGCGACTGCACC
ATCACCGGAACCATCGATTTCATCTTCGGAGACGCGGTAGCTGTGTTCCAGAACTGCAAA
TTGATTGCGAGAAAACCCGAGGAGATGCAGACGCAGGCTATCACTATCGCGGCTCAGGGA
AGGAACCAGCAATTTGGAACAGGTGCGATCATTATACAGAACTGCACGATCACTGCTGAG
CCAGTTCTGCTCGCTATCAACCCGCCACGTAACAAGGCATACCTCGGACGTCCATGGAAG
TTGTACTCAAGGACAATAATCATGCAATCTCAGATTGATGGATTCATTGATCCTGAAGGA
TGGACACCATGGGCTGGTACTTTTGCCCTTGACACTCTATATTTTGTTGAATATCAAAAT
AGAGGTCCAGGTGCAAATACAGATAAGAGAGTGAATTGGAAGAATTATATCAAGAATCCA
ACACCAGATGTTATTGCTAAATTTACTCCTGGAGTTGTGCTTAAAGGTGGTGATAATACT
GATACTTGGGTTACTAAAACTGGTGTCCCATATGAACCAGGGATGATGAAGGTGTAA

Peptide Sequence

PEP ID

XP_016470819.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MADAGKKKIAIAGISSILLVACIVGAAVTLTKKGNDDSSNSQVSTSTKNVQAMCQPTQYK
ETCEKSLFSAKNTSDPKELIKTAFDSTINEIASSIKNSAPFKEAANDPRTKDALKVCDEV
LDRSIEEIKRSFNKFDSSDVKSLVKDYIYDLRSWLSSAVTFETTCIDAFANTTGDTGEKM
KNLLKNAHELSTNALDIVSSFEKQVEDLQILGINNRRLLTVEAGNRRLLQVAPLKPNVVV
AQDGSGQHKSINEALKTVPPNNAQPYVIFIKAGIYNEYVQVANTMTNVVFIGEGPNKTKI
TGNKNYLDGLPVFSTATVAISGQGFVAKDIGFENSAGPLKHQAVAVRVSAEMAVFQNCQI
DGYQYTLMTHVGRQFYRDCTITGTIDFIFGDAVAVFQNCKLIARKPEEMQTQAITIAAQG
RNQQFGTGAIIIQNCTITAEPVLLAINPPRNKAYLGRPWKLYSRTIIMQSQIDGFIDPEG
WTPWAGTFALDTLYFVEYQNRGPGANTDKRVNWKNYIKNPTPDVIAKFTPGVVLKGGDNT
DTWVTKTGVPYEPGMMKV

Transcript Sequence

Gene sequence data has not been registered.